1. 2016/12-至今，中山大学，环境科学与工程学院，教授
2. 2013/04-2015/08，美国俄克拉荷马大学，环境基因组研究所，博士后，合作导师：周集中教授
3. 2011/11-2016/11，中国科学院水生生物研究所，高级实验师
4. 2009/07-2011/10，中国科学院水生生物研究所，实验师

1. 国家自然科学基金重大研究计划，92051120，富营养化湖泊微生物驱动的脱氮机制和生态效应，2021-2023，82万，在研，主持
2. 国家自然科学基金面上项目，31672262，淡水原生动物群落构建与演替规律及其对水产养殖的意义，2017-2020，60万，在研，主持
3. 国家自然科学基金青年项目，31400109，肠道微生物组在转基因鲤糖代谢中的作用及调控机制研究，2015/01-2017/12，25万元，已结题，主持
4. 国家自然科学基金面上项目，31071896，水体生态系统下毛类纤毛虫rRNA基因多样性分析及其在生态学研究中的应用，2011/01-2013/12，34万元，已结题，主持
5. 中山大学“百人计划”引进人才项目，2016年，环境科学
6. 中国科学院青年创新促进会人才项目，2012年，水生生物学
7. 科技基础资源调查专项，湖泊微生物宏基因组分析与基因资源库建立，2017FY100303，2017/02-2022/01，577万元，在研，参加
8. 国家自然科学基金面上项目，31172084，鱼类消化道微生物群落结构与宿主的关系，2012/01-2015/12，62万元，已结题，参加
9. 国家自然科学基金面上项目，30970358，草鱼消化道内微生物及其与食物组成的关系，2010/01-2012/12，33万元，已结题，参加
10. 973课题子任务，2008CB418105，浮游动物群落及其DNA指纹结构对改性土壤除藻处理的效应，52万元，2008/07-2013/06，已结题，参加
11. 国家自然科学基金面上项目，30770298，浮游生物群落宏基因组与其环境理化因子的关系，2008/01-2010/12，40万元，已结题，参加
研究成果

1. 近5年内发表的5篇代表性论著
[1] Wu Bo, Liu Feifei, Zhou Aifen, Li Juan, Shu Longfei, Kempher Megan L., Yang Xueqin, Ning Daliang, Pan Feiyan, Zane Grant M., Wall Judy D., Van Nostrand Joy D., Juneau Philippe, Chen Shouwen*, Yan Qingyun*, Zhou Jizhong*, He Zhili*. Experimental evolution reveals nitrate tolerance mechanisms in Desulfovibrio vulgaris. The ISME Journal, 2020, 14: 2862-2876.
[2] Feng Jiajie, Wang Cong, Lei Jiesi, Yang Yunfeng*, Yan Qingyun, Zhou Xishu, Tao Xuanyu, Ning Daliang, Yuan Mengting M, Qin Yujia, Shi Zhou J, Guo Xue, He Zhili, Van Nostrand Joy D, Wu Liyou, Bracho-Garillo Rosvel G, Penton C. Ryan, Cole James R, Konstantinidis Konstantinos T, Luo Yiqi, Schuur Edward A, Tiedje James M, Zhou Jizhong*. Warming-induced permafrost thaw exacerbates tundra soil carbon decomposition mediated by microbial community. Microbiome, 2020, 8: 3.
[3] He Zhili#*, Deng Ye#, Xu Meiying#, Liang Junyi, Xiong Jinbo, Yu Hao, Wu Liyou, Xue Kai, Shi Shengjing, Wu Bo, Van Nostrand Joy D., Hobbie Sarah E., Reich Peter B., Schadt Christopher W., Kent Angela D., Pendall Elise, Wallenstein Matthew, Luo Yiqi, Yan Qingyun*, Zhou Jizhong*. Microbial gene abundances reveal consistent effects of elevated carbon dioxide on ecosystem functioning. Environment International, 2020, 144: 106068.
[4] Liu Xingyu#, Yang Chao#, Yu Xiaoli, Yu Huang, Zhuang Wei, Gu Hang, Xu Kui, Zheng Xiafei, Wang Cheng, Xiao Fanshu, Wu Bo, He Zhili, Yan Qingyun*. Revealing structure and assembly for rhizophyte-endophyte diazotrophic community in mangrove ecosystem after introduced Sonneratia apetala and Laguncularia racemose. Science of the Total Environment, 2020, 721: 137807.
[5] Wang Binhao, Zheng Xiafei, Zhang Hangjun, Xiao Fanshu, Gu Hang, Zhang Keke, He Zhili, Liu Xiang, Yan Qingyun*. Bacterial community responses to tourism development in the Xixi National Wetland Park, China. Science of the Total Environment, 2020, 720: 137570.
2. 近5年内发表的其余论著
[1] Zheng Xiafei, Zhang Keke, Yang Tony, He Zhili, Shu Longfei, Xiao Fanshu, Wu Yongjie, Wang Binhao, Yu Huang, Yan Qingyun*. Sediment resuspension drives protist metacommunity structure and assembly in grass carp (Catenopharyngodon idella) aquaculture ponds. Science of the Total Environment, 2020, 142840. https://doi.org/10.1016/j.scitotenv.2020.142840.
[2] Yu Xiaoli, Yang Xueqin, Wu Yongjie, Peng Yisheng, Yang Tony, Xiao Fanshu, Zhong Qiuping, Xu Kui, Shu Longfei, He Qiang, Tian Yun, Yan Qingyun, Wang Cheng*, Wu Bo*, He Zhili*. Sonneratia apetala introduction alters methane cycling microbial communities and increases methane emissions in mangrove ecosystems. Soil Biology & Biochemistry, 2020, 144: 107775.
[3] Tu Qichao*, Yan Qingyun, Deng Ye, Michaletz Sean T., Buzzard, Vanessa, Weiser Michael D., Waide, Robert, Ning Daliang, Wu Liyou, He Zhili, Zhou Jizhong*. Biogeographic patterns of microbial co-occurrence ecological networks in six American forests. Soil Biology & Biochemistry, 2020, 144: 107897.
[4] Li Mingyue, Fang Anqi, Yu Xiaoli, Zhang Keke, He Zhili, Wang Cheng, Peng Yisheng, Xiao Fanshu*, Yang Tony, Zhang Wei, Zheng Xiafei, Zhong Qiuping, Liu Xingyu, Yan Qingyun*. Microbially-driven sulfur cycling microbial communities in different mangrove sediments. Chemosphere, 2020, 128597. https://doi.org/10.1016/j.chemosphere.2020.128597.
[5] Wang Binhao, Zheng Xiafei, Zhang Hangjun, Xiao Fanshu*, He Zhili, Yan Qingyun*. Keystone taxa of water microbiome respond to environmental quality and predict water contamination, Environmental Research, 2020, 187: 109666.